Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSDARP00000125042 | boc | ENSDARP00000125042 | ENSDARP00000098383 | Patched 1. | BOC cell adhesion-associated, oncogene-regulated. | 0.561 |
ENSDARP00000125042 | cdon | ENSDARP00000125042 | ENSDARP00000081773 | Patched 1. | Cell adhesion molecule-related/down-regulated by oncogenes. | 0.893 |
ENSDARP00000125042 | gli1 | ENSDARP00000125042 | ENSDARP00000129932 | Patched 1. | GLI family zinc finger 1. | 0.961 |
ENSDARP00000125042 | gli2a | ENSDARP00000125042 | ENSDARP00000010693 | Patched 1. | GLI family zinc finger 2a. | 0.959 |
ENSDARP00000125042 | gli3 | ENSDARP00000125042 | ENSDARP00000058991 | Patched 1. | GLI family zinc finger 3. | 0.955 |
ENSDARP00000125042 | hhip | ENSDARP00000125042 | ENSDARP00000079486 | Patched 1. | Hedgehog-interacting protein. | 0.915 |
ENSDARP00000125042 | shhb | ENSDARP00000125042 | ENSDARP00000056746 | Patched 1. | Tiggy-winkle hedgehog protein C-product; Intercellular signal essential for a variety of patterning events during development. Involved in dorso-ventral patterning of the brain and in early patterning of the developing eyes. | 0.996 |
ENSDARP00000125042 | smo | ENSDARP00000125042 | ENSDARP00000013486 | Patched 1. | Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. | 0.996 |
boc | ENSDARP00000125042 | ENSDARP00000098383 | ENSDARP00000125042 | BOC cell adhesion-associated, oncogene-regulated. | Patched 1. | 0.561 |
boc | cdon | ENSDARP00000098383 | ENSDARP00000081773 | BOC cell adhesion-associated, oncogene-regulated. | Cell adhesion molecule-related/down-regulated by oncogenes. | 0.911 |
boc | gli1 | ENSDARP00000098383 | ENSDARP00000129932 | BOC cell adhesion-associated, oncogene-regulated. | GLI family zinc finger 1. | 0.486 |
boc | gli2a | ENSDARP00000098383 | ENSDARP00000010693 | BOC cell adhesion-associated, oncogene-regulated. | GLI family zinc finger 2a. | 0.596 |
boc | hhip | ENSDARP00000098383 | ENSDARP00000079486 | BOC cell adhesion-associated, oncogene-regulated. | Hedgehog-interacting protein. | 0.702 |
boc | ptch1 | ENSDARP00000098383 | ENSDARP00000025418 | BOC cell adhesion-associated, oncogene-regulated. | Protein patched homolog 1. | 0.949 |
boc | ptch2 | ENSDARP00000098383 | ENSDARP00000071771 | BOC cell adhesion-associated, oncogene-regulated. | Protein patched homolog 1; Acts as a receptor for sonic hedgehog (SHH), indian hedgehog (IHH) and desert hedgehog (DHH). Associates with the smoothened protein (SMO) to transduce the hedgehog's proteins signal (By similarity). Belongs to the patched family. | 0.981 |
boc | shhb | ENSDARP00000098383 | ENSDARP00000056746 | BOC cell adhesion-associated, oncogene-regulated. | Tiggy-winkle hedgehog protein C-product; Intercellular signal essential for a variety of patterning events during development. Involved in dorso-ventral patterning of the brain and in early patterning of the developing eyes. | 0.912 |
boc | smo | ENSDARP00000098383 | ENSDARP00000013486 | BOC cell adhesion-associated, oncogene-regulated. | Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. | 0.762 |
cdon | ENSDARP00000125042 | ENSDARP00000081773 | ENSDARP00000125042 | Cell adhesion molecule-related/down-regulated by oncogenes. | Patched 1. | 0.893 |
cdon | boc | ENSDARP00000081773 | ENSDARP00000098383 | Cell adhesion molecule-related/down-regulated by oncogenes. | BOC cell adhesion-associated, oncogene-regulated. | 0.911 |
cdon | gli2a | ENSDARP00000081773 | ENSDARP00000010693 | Cell adhesion molecule-related/down-regulated by oncogenes. | GLI family zinc finger 2a. | 0.760 |
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