STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
si:dkey-61f9.1Si:dkey-61f9.1. (364 aa)    
Predicted Functional Partners:
ENSDARP00000135796
Si:ch211-25d12.7.
    
 
 0.850
sla2
Src-like-adaptor 2.
    
 
 0.745
nr1d2b
Nuclear receptor subfamily 1, group D, member 2b.
    
 
 0.742
Dock2-like
Uncharacterized protein.
      
 0.698
abcd1
ATP-binding cassette sub-family D member 1; Plays a role in the transport of free very-long-chain fatty acids (VLCFAs) as well as their CoA-esters across the peroxisomal membrane by acting as an ATP-specific binding subunit releasing ADP after ATP hydrolysis (By similarity). Involved in oligodendrocyte patterning and myelination.
      
 0.670
clec3ba
C-type lectin domain family 3, member Ba.
      
 0.649
nr1d2a
Nuclear receptor subfamily 1, group D, member 2a.
    
 
 0.647
serinc1
Serine incorporator 1.
    
 
 0.483
laynb
Layilin b.
      
 0.457
uts2b
Prepro-urotensin II-beta; Urotensin is found in the teleost caudal neurosecretory system. It has a suggested role in osmoregulation and as a corticotropin-releasing factor (By similarity); Belongs to the urotensin-2 family.
      
 0.453
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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