Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
bag3BCL2-associated athanogene 3. (480 aa)    
Predicted Functional Partners:
hspb8
Heat shock protein b8; Belongs to the small heat shock protein (HSP20) family.
   
 
 0.999
stub1
STIP1 homology and U-Box-containing protein 1.
    
 
 0.982
hspa4b
Heat shock protein 4b.
    
 0.957
hspa4a
Heat shock protein 4, like.
    
 0.957
sqstm1
Sequestosome 1.
    
 
 0.944
cryaba
Crystallin, alpha B, a; Belongs to the small heat shock protein (HSP20) family.
   
 
 0.937
dnajb6b
DnaJ heat shock protein family (Hsp40) member B6b.
    
 
 0.912
hspb1
Heat shock protein, alpha-crystallin-related, 1; Belongs to the small heat shock protein (HSP20) family.
   
 
 0.911
hsp70.3
Heat shock cognate 70-kd protein, tandem duplicate 3; Belongs to the heat shock protein 70 family.
   
 0.909
hsp70.1
Heat shock cognate 70-kd protein, tandem duplicate 1; Belongs to the heat shock protein 70 family.
   
 0.909
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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