Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
samm50lSorting and assembly machinery component 50 homolog B; May play a role in the maintenance of the structure of mitochondrial cristae; Belongs to the SAM50/omp85 family. (469 aa)    
Predicted Functional Partners:
mtx2
Mtx2 protein.
   
 
 0.959
map1lc3c
Microtubule-associated protein 1 light chain 3 gamma.
    
  0.950
zgc:92606
Zgc:92606.
    
  0.945
map1lc3cl
Microtubule-associated protein 1 light chain 3 gamma,-like.
    
  0.945
samm50
Sorting and assembly machinery component 50 homolog A; May play a role in the maintenance of the structure of mitochondrial cristae; Belongs to the SAM50/omp85 family.
     
  0.944
chchd3a
MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
   
 
 0.938
immt
MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
   
 
 0.938
tomm22
Translocase of Outer mitochondrial membrane 22 homolog (Yeast).
   
 
 0.899
map1lc3a
Microtubule-associated protein 1 light chain 3 alpha.
    
 0.887
gabarapl2
GABA(A) receptor-associated protein-like 2.
    
 0.884
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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