Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
A0JMQ2_DANRELOC100149441 protein. (572 aa)    
Predicted Functional Partners:
polr3h
Polymerase (RNA) III (DNA directed) polypeptide H.
    
 
 0.695
polr2f
Polymerase (RNA) II (DNA directed) polypeptide F.
    
 
 0.642
vasnb
LOC100004428 protein.
   
 0.612
ahsa1a
AHA1, activator of heat shock protein ATPase homolog 1a.
    
 
 0.598
syngr1a
Synaptogyrin.
      
 0.595
myhc4
Myosin heavy chain 4; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.532
traf7
TNF receptor-associated factor 7.
    
 0.532
ftr52p
FinTRIM family, member 52, pseudogene.
    
  0.421
RANBP2
Si:ch1073-55a19.2.
    
  0.421
eef1g
Elongation factor 1-gamma; Probably plays a role in anchoring the complex to other cellular components.
    
   0.413
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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