Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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grin3baGlutamate receptor, ionotropic, N-methyl-D-aspartate 3Ba; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (1156 aa)    
Predicted Functional Partners:
pdyn
Prodynorphin.
   
 
 0.879
plppr3b
Phospholipid phosphatase-related 3b.
   
 
 0.867
grin1b
Glutamate receptor, ionotropic, N-methyl D-aspartate 1b.
   
 0.823
grin1a
Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.
   
 0.823
grin3a
Glutamate receptor, ionotropic, N-methyl-D-aspartate 3A.
   
 0.802
med16
Mediator of RNA polymerase II transcription subunit 16; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
   
 
 0.767
ppp1cb
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.697
ppp1cbl
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.697
p2rx4b
P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.
     
  0.692
p2rx3b
P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.
     
 0.669
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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