STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpm6aaGlycoprotein M6Aa. (278 aa)    
Predicted Functional Partners:
pbx3b
Pre-B-cell leukemia transcription factor 3b.
   
  
 0.647
slc6a1b
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
   
 
 0.638
elavl3
ELAV-like protein; Belongs to the RRM elav family.
   
 
 0.633
bhlhe22
Basic helix-loop-helix family, member e22.
   
  
 0.622
mab21l2
Protein mab-21-like 2; Required for eye morphogenesis. May promote the survival of proliferating retinal progenitor cells; Belongs to the mab-21 family.
   
    0.615
adcyap1b
Adenylate cyclase-activating polypeptide 1b.
   
  
 0.615
atp1a1b
Sodium/potassium-transporting ATPase subunit alpha.
   
 
 0.610
tfdp2
Transcription factor.
   
  
 0.579
stmn2a
Stathmin; Belongs to the stathmin family.
   
  
 0.559
fabp7a
Fatty acid-binding protein 7, brain, a; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
   
  
 0.554
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.