Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
E7F467_DANRESi:ch1073-513e17.1. (486 aa)    
Predicted Functional Partners:
slc17a5
Solute carrier family 17 member 5.
     
  0.950
HECTD4
HECT domain E3 ubiquitin protein ligase 4.
    
 
 0.626
slc32a1
Solute carrier family 32 (GABA vesicular transporter), member 1.
   
 
 0.613
brap
BRCA1-associated protein.
      
 0.603
slc39a7
Zinc transporter Slc39a7; Zinc transporter, that transports Zn(2+) from the endoplasmic reticulum/Golgi apparatus to the cytosol; Belongs to the ZIP transporter (TC 2.A.5) family. KE4/Catsup subfamily.
   
  
 0.549
grasp
GRP1 (General receptor for phosphoinositides 1)-associated scaffold protein like.
    
 
 0.521
st6galnac3
N-acetylgalactosaminide alpha-2,6-sialyltransferase (sialyltransferase 7C); Belongs to the glycosyltransferase 29 family.
      
 0.511
st6galnac4
Alpha-2,6-sialyltransferase; Belongs to the glycosyltransferase 29 family.
      
 0.511
slc18a3a
Probable vesicular acetylcholine transporter-A; Involved in acetylcholine transport into synaptic vesicles. Belongs to the major facilitator superfamily. Vesicular transporter family.
     
 0.451
slc18a3b
Probable vesicular acetylcholine transporter-B; Involved in acetylcholine transport into synaptic vesicles. Belongs to the major facilitator superfamily. Vesicular transporter family.
     
 0.451
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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