STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zfpm2aZinc finger protein, FOG family member 2a. (1142 aa)    
Predicted Functional Partners:
gata4
GATA-binding protein 4.
    
 0.804
esrrgb
Estrogen-related receptor gamma b.
    
 
 0.723
gata1a
GATA-binding protein 1a.
    
 0.685
gata5
Transcription factor gata5.
    
 0.683
gata6
GATA-binding protein 6.
    
 0.683
esrrd
Estrogen-related receptor delta.
    
 
 0.678
gata3
Transcription factor GATA-3.
    
 0.566
gata2a
GATA-binding protein 2a.
    
 0.566
esrrga
Estrogen-related receptor gamma a.
   
 
 0.559
nkx2.5
NK2 homeobox 5.
      
 0.528
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.