STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jdp2aJun dimerization protein 2a. (199 aa)    
Predicted Functional Partners:
jun
Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.
   
 
 0.635
jund
JunD proto-oncogene, AP-1 transcription factor subunit.
   
 
 0.628
spc25
SPC25 component of NDC80 kinetochore complex.
    
 
 0.526
nuf2
Kinetochore protein Nuf2; Acts as a component of the essential kinetochore-associated NDC80 complex, which is required for chromosome segregation and spindle checkpoint activity.
   
 
 0.514
june
JunE proto-oncogene, AP-1 transcription factor subunit.
   
 
 0.514
junba
JunB proto-oncogene, AP-1 transcription factor subunit a.
   
 
 0.504
junbb
JunB proto-oncogene, AP-1 transcription factor subunit b.
   
 
 0.504
sorbs2a
Sorbin and SH3 domain-containing 2a.
      
 0.457
A2CEF0_DANRE
Si:ch211-244o22.2.
   
  
 0.411
atf7a
Cyclic AMP-dependent transcription factor ATF-7; Plays important functions in early cell signaling. Binds the cAMP response element (CRE) (consensus: 5'-GTGACGT[AG][AG]-3'), a sequence present in many viral and cellular promoters.
    
 
0.406
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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