Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
bcl7bbB-cell CLL/lymphoma 7 protein family member B-B; Belongs to the BCL7 family. (201 aa)    
Predicted Functional Partners:
bcl7a
B-cell CLL/lymphoma 7 protein family member A.
    
0.953
bcl7ba
B-cell CLL/lymphoma 7 protein family member B-A; Belongs to the BCL7 family.
  
  
 
0.895
ss18
Synovial sarcoma translocation, chromosome 18 (H. sapiens).
   
 0.816
wdr53
WD repeat domain 53.
      
 0.813
cux1a
Homeobox protein cut-like.
      
 0.811
brd9
Bromodomain-containing protein 9; Plays a role in chromatin remodeling and regulation of transcription. Acts as a chromatin reader that recognizes and binds acylated histones: binds histones that are acetylated and/or butyrylated.
    
 0.793
dnajc30b
DnaJ (Hsp40) homolog, subfamily C, member 30b.
      
 0.778
bud23
BUD23 rRNA methyltransferase and ribosome maturation factor.
      
 0.737
gtf2ird1
GTF2I repeat domain-containing 1.
      
 0.735
ppp5c
Serine/threonine-protein phosphatase.
      
 0.720
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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