Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dusp19aDual-specificity phosphatase 19a. (213 aa)    
Predicted Functional Partners:
paqr3a
Progestin and adipoQ receptor family member IIIa.
      
 0.966
shpk
Sedoheptulokinase.
   
  
 0.787
nol9
Nucleolar protein 9.
   
  
 0.708
map2k7
Mitogen-activated protein kinase kinase 7.
    
 
 0.700
alas1
5-aminolevulinate synthase.
   
   0.595
alas2
5-aminolevulinate synthase, erythroid-specific, mitochondrial; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
   
   0.595
fkbp9
Peptidylprolyl isomerase.
   
 
 0.548
tbccd1
TBCC domain-containing protein 1; May play a role in the regulation of centrosome and Golgi apparatus positioning; Belongs to the TBCC family.
      
 0.546
gins1
GINS complex subunit 1 (Psf1 homolog).
   
 
 0.512
lrrc3b
Leucine-rich repeat-containing protein 3B.
    
 
 0.510
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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