STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lcp2aLymphocyte cytosolic protein 2a. (501 aa)    
Predicted Functional Partners:
wdr55
WD repeat-containing protein 55; Nucleolar protein that acts as a modulator of rRNA synthesis. Plays a central role during organogenesis (By similarity).
      
 0.995
grap2a
GRB2-related adaptor protein 2a.
   
 0.992
nck1b
Cytoplasmic protein.
    
 0.959
slbp2
Stem-loop-binding protein 2.
    
 
 0.954
fybb
FYN-binding protein b.
   
 
 0.937
pcdh2aa1
Protocadherin 2 alpha a 1.
    
 
 0.936
grb2b
Growth factor receptor-bound protein 2b.
   
 0.931
grap2b
GRB2-related adaptor protein 2b.
   
 
 0.929
B3DHD5_DANRE
Si:ch211-188c16.1 protein.
    
  0.903
syk
Tyrosine-protein kinase.
   
 0.894
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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