Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KHDRBS3 | fubp3 | ENSDARP00000135217 | ENSDARP00000111831 | KH RNA binding domain containing, signal transduction associated 3. | Far upstream element (FUSE)-binding protein 3. | 0.752 |
| KHDRBS3 | khdc4 | ENSDARP00000135217 | ENSDARP00000059559 | KH RNA binding domain containing, signal transduction associated 3. | KH homology domain-containing protein 4; RNA-binding protein involved in pre-mRNA splicing. Interacts with the PRP19C/Prp19 complex/NTC/Nineteen complex which is part of the spliceosome. Involved in regulating splice site selection. Binds preferentially RNA with A/C rich sequences and poly-C stretches. | 0.813 |
| KHDRBS3 | khsrp | ENSDARP00000135217 | ENSDARP00000032748 | KH RNA binding domain containing, signal transduction associated 3. | KH-type-splicing regulatory protein. | 0.581 |
| cdc5l | ctnnbl1 | ENSDARP00000064312 | ENSDARP00000136166 | CDC5 cell division cycle 5-like (S. pombe). | Catenin, beta-like 1. | 0.997 |
| cdc5l | fubp3 | ENSDARP00000064312 | ENSDARP00000111831 | CDC5 cell division cycle 5-like (S. pombe). | Far upstream element (FUSE)-binding protein 3. | 0.431 |
| cdc5l | khdc4 | ENSDARP00000064312 | ENSDARP00000059559 | CDC5 cell division cycle 5-like (S. pombe). | KH homology domain-containing protein 4; RNA-binding protein involved in pre-mRNA splicing. Interacts with the PRP19C/Prp19 complex/NTC/Nineteen complex which is part of the spliceosome. Involved in regulating splice site selection. Binds preferentially RNA with A/C rich sequences and poly-C stretches. | 0.727 |
| cdc5l | khsrp | ENSDARP00000064312 | ENSDARP00000032748 | CDC5 cell division cycle 5-like (S. pombe). | KH-type-splicing regulatory protein. | 0.469 |
| cdc5l | sf1 | ENSDARP00000064312 | ENSDARP00000130303 | CDC5 cell division cycle 5-like (S. pombe). | Splicing factor 1. | 0.976 |
| ctnnbl1 | cdc5l | ENSDARP00000136166 | ENSDARP00000064312 | Catenin, beta-like 1. | CDC5 cell division cycle 5-like (S. pombe). | 0.997 |
| ctnnbl1 | khdc4 | ENSDARP00000136166 | ENSDARP00000059559 | Catenin, beta-like 1. | KH homology domain-containing protein 4; RNA-binding protein involved in pre-mRNA splicing. Interacts with the PRP19C/Prp19 complex/NTC/Nineteen complex which is part of the spliceosome. Involved in regulating splice site selection. Binds preferentially RNA with A/C rich sequences and poly-C stretches. | 0.650 |
| ctnnbl1 | sf1 | ENSDARP00000136166 | ENSDARP00000130303 | Catenin, beta-like 1. | Splicing factor 1. | 0.478 |
| ddah2 | khdc4 | ENSDARP00000137861 | ENSDARP00000059559 | Dimethylarginine dimethylaminohydrolase 2. | KH homology domain-containing protein 4; RNA-binding protein involved in pre-mRNA splicing. Interacts with the PRP19C/Prp19 complex/NTC/Nineteen complex which is part of the spliceosome. Involved in regulating splice site selection. Binds preferentially RNA with A/C rich sequences and poly-C stretches. | 0.744 |
| fubp3 | KHDRBS3 | ENSDARP00000111831 | ENSDARP00000135217 | Far upstream element (FUSE)-binding protein 3. | KH RNA binding domain containing, signal transduction associated 3. | 0.752 |
| fubp3 | cdc5l | ENSDARP00000111831 | ENSDARP00000064312 | Far upstream element (FUSE)-binding protein 3. | CDC5 cell division cycle 5-like (S. pombe). | 0.431 |
| fubp3 | khdc4 | ENSDARP00000111831 | ENSDARP00000059559 | Far upstream element (FUSE)-binding protein 3. | KH homology domain-containing protein 4; RNA-binding protein involved in pre-mRNA splicing. Interacts with the PRP19C/Prp19 complex/NTC/Nineteen complex which is part of the spliceosome. Involved in regulating splice site selection. Binds preferentially RNA with A/C rich sequences and poly-C stretches. | 0.858 |
| fubp3 | khdrbs1a | ENSDARP00000111831 | ENSDARP00000069273 | Far upstream element (FUSE)-binding protein 3. | KH domain-containing, RNA-binding, signal transduction-associated 1a. | 0.636 |
| fubp3 | khdrbs2 | ENSDARP00000111831 | ENSDARP00000091908 | Far upstream element (FUSE)-binding protein 3. | KH domain-containing, RNA-binding, signal transduction-associated protein 2; RNA-binding protein that plays a role in the regulation of alternative splicing; Belongs to the KHDRBS family. | 0.695 |
| fubp3 | sf1 | ENSDARP00000111831 | ENSDARP00000130303 | Far upstream element (FUSE)-binding protein 3. | Splicing factor 1. | 0.481 |
| khdc4 | KHDRBS3 | ENSDARP00000059559 | ENSDARP00000135217 | KH homology domain-containing protein 4; RNA-binding protein involved in pre-mRNA splicing. Interacts with the PRP19C/Prp19 complex/NTC/Nineteen complex which is part of the spliceosome. Involved in regulating splice site selection. Binds preferentially RNA with A/C rich sequences and poly-C stretches. | KH RNA binding domain containing, signal transduction associated 3. | 0.813 |
| khdc4 | cdc5l | ENSDARP00000059559 | ENSDARP00000064312 | KH homology domain-containing protein 4; RNA-binding protein involved in pre-mRNA splicing. Interacts with the PRP19C/Prp19 complex/NTC/Nineteen complex which is part of the spliceosome. Involved in regulating splice site selection. Binds preferentially RNA with A/C rich sequences and poly-C stretches. | CDC5 cell division cycle 5-like (S. pombe). | 0.727 |
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