STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F1QQL3_DANRESi:ch211-137j23.6. (316 aa)    
Predicted Functional Partners:
appb
Amyloid beta (A4) precursor protein b.
    
  0.513
ccl35.2
Chemokine (C-C motif) ligand 35, duplicate 2.
    
  0.511
ccl35.1
Chemokine (C-C motif) ligand 35, duplicate 1.
    
  0.511
ccl39.2
Chemokine (C-C motif) ligand 39, duplicate 2.
    
  0.511
anxa1a
Annexin.
     
  0.499
pomca
Pro-opiomelanocortin protein.
    
  0.456
X1WGR6_DANRE
Si:dkey-42l23.3.
  
  
 
0.409
rln3b
Relaxin 3b.
    
  0.409
X1WCK1_DANRE
Si:dkey-42l23.6.
  
  
 
0.407
X1WG37_DANRE
Si:dkey-42l23.9.
  
  
 
0.407
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.