STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppp1r35Protein phosphatase 1 regulatory subunit 35; May inhibit PPP1CA phosphatase activity. (251 aa)    
Predicted Functional Partners:
pdxdc1
Pyridoxal-dependent decarboxylase domain-containing protein 1.
      
 0.919
bahd1
Bromo adjacent homology domain-containing 1.
      
 0.895
camta2
Calmodulin-binding transcription activator 2.
      
 0.860
Camta2
Uncharacterized protein.
      
 0.852
fndc3bb
Fibronectin type III domain-containing 3Bb.
      
 0.807
eci1
Enoyl-CoA delta isomerase 1; Belongs to the enoyl-CoA hydratase/isomerase family.
      
 0.745
ghsra
Growth hormone secretagogue receptor a; Belongs to the G-protein coupled receptor 1 family.
      
 0.735
tatdn2
TatD DNase domain-containing 2.
      
 0.735
rttn
Rotatin.
   
  
 0.702
mboat4
Ghrelin O-acyltransferase; Mediates the octanoylation of ghrelin at 'Ser-3'. Can use a variety of fatty acids as substrates including octanoic acid, decanoic acid and tetradecanoic acid; Belongs to the membrane-bound acyltransferase family.
      
 0.673
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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