Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hspa13Heat shock protein 70 family, member 13. (438 aa)    
Predicted Functional Partners:
hspa12a
Heat shock protein 12A.
     
 0.949
hspa12b
Heat shock protein 12B.
     
 0.917
hspe1
Heat shock 10 protein 1 (Chaperonin 10); Belongs to the GroES chaperonin family.
  
 
 0.835
hsp90b1
Heat shock protein 90, beta (Grp94), member 1.
   
 0.832
dnajb6a
DnaJ heat shock protein family (Hsp40) member B6a.
 
 0.804
tbrg1
Transforming growth factor beta regulator 1.
    
 
 0.803
hspa9
Heat shock protein 9; Belongs to the heat shock protein 70 family.
  
0.800
dnajb1a
DnaJ heat shock protein family (Hsp40) member B1a.
 
 0.799
bag3
BCL2-associated athanogene 3.
   
 0.786
zbtb47a
Zinc finger and BTB domain-containing 47a.
    
 0.785
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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