STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hspa13Heat shock protein 70 family, member 13. (438 aa)    
Predicted Functional Partners:
hspa12a
Heat shock protein 12A.
     
 0.942
hspa12b
Heat shock protein 12B.
     
 0.898
bag3
BCL2-associated athanogene 3.
   
 0.868
hspe1
Heat shock 10 protein 1 (Chaperonin 10); Belongs to the GroES chaperonin family.
  
 
 0.861
dnajb1a
DnaJ heat shock protein family (Hsp40) member B1a.
 
 0.808
hsp90b1
Heat shock protein 90, beta (Grp94), member 1.
   
 
 0.807
dnajb6a
DnaJ heat shock protein family (Hsp40) member B6a.
 
 0.805
mrpl2
Mitochondrial ribosomal protein L2.
   
 
 0.792
tbrg1
Transforming growth factor beta regulator 1.
    
 
 0.782
rnpc3
RNA-binding region-containing protein 3; Participates in pre-mRNA U12-dependent splicing, performed by the minor spliceosome which removes U12-type introns. U12-type introns comprise less than 1% of all non-coding sequences.
   
  
 0.766
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.