STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
itgbl1Integrin, beta-like 1. (406 aa)    
Predicted Functional Partners:
itgb1bp1
Integrin beta-1-binding protein 1.
    
 
 0.742
SH3RF3
Si:ch211-124n19.2.
   
  
 0.690
htr1fb
5-hydroxytryptamine (serotonin) receptor 1Fb.
   
  
 0.670
ahsa1b
AHA1, activator of heat shock protein ATPase homolog 1b.
      
 0.669
akap17a
A kinase (PRKA) anchor protein 17A.
      
 0.664
nuak1b
NUAK family, SNF1-like kinase, 1b.
      
 0.661
fam167b
Family with sequence similarity 167 member B.
      
 0.660
asmtl
Acetylserotonin O-methyltransferase-like.
      
 0.605
itga10
Integrin, alpha 10; Belongs to the integrin alpha chain family.
   
 
 0.572
cdca4
Cell division cycle-associated 4.
      
 0.570
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.