Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ceacam1CEA cell adhesion molecule 1. (1024 aa)    
Predicted Functional Partners:
ENSDARP00000141365
Si:dkeyp-92c9.4.
   
 0.620
tgfb1a
Transforming growth factor beta; Belongs to the TGF-beta family.
     
 0.558
zgc:198329
cDNA, clone cssl:d0175.
   
0.544
atp1a1a.5
Sodium/potassium-transporting ATPase subunit alpha.
   
  
 0.529
itga5
Integrin, alpha 5 (fibronectin receptor, alpha polypeptide); Belongs to the integrin alpha chain family.
    
  0.515
rasgrp4
RAS guanyl-releasing protein 4.
   
  
 0.509
ppp2r5d
Protein phosphatase 2, regulatory subunit B', delta.
    
 
 0.504
gpc1a
Secreted glypican-1; Cell surface proteoglycan that bears heparan sulfate; Belongs to the glypican family.
     
  0.500
fn1a
Fibronectin 1a.
     
  0.500
sdc2
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
  0.500
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.