STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crygs2Crystallin, gamma S2; Belongs to the beta/gamma-crystallin family. (174 aa)    
Predicted Functional Partners:
ca15c
Carbonic anhydrase XV c; Belongs to the alpha-carbonic anhydrase family.
      
 0.803
guca1g
Guanylate cyclase activator 1g.
   
  
 0.744
impg2b
Interphotoreceptor matrix proteoglycan 2b.
      
 0.744
hsf4
Heat shock transcription factor 4.
   
  
 0.652
guca1d
Guanylate cyclase activating protein 4.
      
 0.595
slc24a2
Solute carrier family 24 member 2; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
      
 0.580
gjd2b
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
      
 0.566
bfsp2
Beaded filament structural protein 2, phakinin; Belongs to the intermediate filament family.
   
  
 0.563
guca1b
Guanylate cyclase-activating protein 2.
   
  
 0.543
gja3
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
   
  
 0.542
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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