Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
bmf2BCL2-modifying factor 2. (226 aa)    
Predicted Functional Partners:
bmf1
BCL2 modifying factor 1.
      
 0.925
bcl2l1
Bcl-XL-like protein 1.
    
 
 0.915
bcl2l11
BCL2-like 11.
    
 
 0.868
zgc:153993
Zgc:153993 protein.
    
 
 0.866
mcl1a
MCL1 apoptosis regulator, BCL2 family member a.
    
 
 0.738
mcl1b
MCL1 apoptosis regulator, BCL2 family member b.
    
 
 0.738
bcl2a
B-cell leukemia/lymphoma 2.
    
 
 0.713
bcl2b
BCL2 apoptosis regulator b.
    
 
 0.713
atp5mea
ATP synthase membrane subunit ea.
   
  
 0.695
dnal4a
Dynein light chain.
    
 
 0.690
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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