Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Q5QNN6_DANRESi:dkey-7c18.24. (111 aa)    
Predicted Functional Partners:
apoda.2
Apolipoprotein Da, duplicate 2; Belongs to the calycin superfamily. Lipocalin family.
      
 0.837
myhz2
Myosin, heavy polypeptide 2, fast muscle-specific; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
  
 0.668
E7FFD0_DANRE
VLIG-type G domain-containing protein.
      
 0.599
Urgcp
VLIG-type G domain-containing protein.
      
 0.578
urgcp
Upregulator of cell proliferation.
      
 0.505
cmklr1l1
Chemokine-like receptor 1 like 2; Belongs to the G-protein coupled receptor 1 family.
      
 0.487
tnni2a.4
Troponin I type 2a (skeletal, fast), tandem duplicate 4.
      
 0.485
F1QQL4_DANRE
Si:ch211-125o16.4.
   
  
 0.461
E7EZJ4_DANRE
Si:dkey-42l23.7.
      
 0.445
rnasel4
Ribonuclease-like 4; Belongs to the pancreatic ribonuclease family.
      
 0.443
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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