Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
pex10Peroxisomal biogenesis factor 10. (318 aa)    
Predicted Functional Partners:
pex12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
    
 0.999
pex13
Peroxisomal biogenesis factor 13.
    
 0.995
pex19
Peroxisomal biogenesis factor 19.
   
 
 0.993
pex14
Peroxisomal biogenesis factor 14.
   
 0.986
pex5
Peroxisomal biogenesis factor 5.
   
 
 0.983
pex6
Peroxisomal biogenesis factor 6.
   
 
 0.983
pex2
Peroxisomal biogenesis factor 2.
   
 
 0.979
pex7
Peroxisomal biogenesis factor 7.
     
 0.969
pex11b
Peroxisomal biogenesis factor 11 beta.
    
 
 0.962
pex16
Peroxisomal membrane protein PEX16; Involved in peroxisome biogenesis. Belongs to the peroxin-16 family.
      
 0.953
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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