STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrps28Mitochondrial ribosomal protein S28. (176 aa)    
Predicted Functional Partners:
mrps16
Mitochondrial ribosomal protein S16.
   
  0.992
mrps26
Novel protein similar to vertebrate mitochondrial ribosomal protein S26 (MRPS26).
   
 0.987
chchd1
Coiled-coil-helix-coiled-coil-helix domain-containing 1.
   
  0.984
mrps21
Mitochondrial ribosomal protein S21.
   
  0.984
MRPS12
Si:dkey-17e16.10; Belongs to the universal ribosomal protein uS12 family.
   
  0.983
mrps23
Mitochondrial ribosomal protein S23.
   
  0.982
mrps27
Mitochondrial ribosomal protein S27.
   
  0.981
mrps24
28S ribosomal protein S24, mitochondrial; Belongs to the universal ribosomal protein uS3 family.
   
  0.980
mrps7
28S ribosomal protein S7, mitochondrial; Belongs to the universal ribosomal protein uS7 family.
   
 0.980
dap3
Death-associated protein 3.
   
  0.979
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.