STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gypcGlycophorin C (Gerbich blood group). (89 aa)    
Predicted Functional Partners:
epb41b
Erythrocyte membrane protein band 4.1 (Elliptocytosis 1, RH-linked).
   
 
 0.884
slc4a1a
Anion exchange protein.
   
  
 0.753
add3b
Adducin 3 (gamma) b.
      
 0.540
bsg
Basigin.
    
 
 0.490
add2
Adducin 2 (beta).
      
 0.480
add1
Adducin 1 (Alpha).
      
 0.452
add3a
Adducin 3 (gamma) a.
      
 0.444
rhag
Rhesus blood group-associated glycoprotein; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily.
   
  
 0.412
cbfa2t3
CBFA2/RUNX1 partner transcriptional co-repressor 3.
      
 0.402
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.