STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adprhl1[Protein ADP-ribosylarginine] hydrolase-like protein 1; Belongs to the ADP-ribosylglycohydrolase family. (350 aa)    
Predicted Functional Partners:
tmco3
Transmembrane and coiled-coil domains 3.
      
 0.870
c2cd2
C2 calcium-dependent domain-containing 2.
      
 0.835
grtp1a
Growth hormone-regulated TBC protein 1-A; May act as a GTPase-activating protein for Rab family protein(s).
 
    
 0.828
slc6a11b
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.803
rnf150b
RING finger protein 150.
      
 0.740
pcid2
PCI domain-containing protein 2; Belongs to the CSN12 family.
      
 0.721
rnf150a
Ring finger protein 150a.
   
  
 0.703
ENSDARP00000109565
Hemicentin 2.
      
 0.662
cand2
Cullin-associated and neddylation-dissociated 2 (putative).
   
 
 0.646
klhl38a
Kelch-like protein 38.
      
 0.644
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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