Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tsc22d2KIAA0669-like protein. (556 aa)    
Predicted Functional Partners:
nrbp1
Nuclear receptor-binding protein 1.
    
 
 0.986
fopnl
Fgfr1op N-terminal-like.
      
 0.736
ube4a
Ubiquitination factor E4A (UFD2 homolog, yeast).
      
 0.727
tsc22d3
TSC22 domain family, member 3.
   
 
 0.680
tbl2
Transducin beta-like 2.
    
 
 0.680
zgc:153012
Zgc:153012.
   
 
 0.680
tsc22d1
TSC22 domain family, member 1.
   
 
 0.680
tsc22d3-2
Zgc:64189.
   
 
 0.680
tsc22d3-3
Si:ch211-220e11.3.
   
 
 0.680
fip1l1b
Pre-mRNA 3'-end-processing factor FIP1; Involved in mRNA processing; Belongs to the FIP1 family.
      
 0.661
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.