STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tnfrsf19Tumor necrosis factor receptor superfamily, member 19. (356 aa)    
Predicted Functional Partners:
eda
Ectodysplasin A; Belongs to the tumor necrosis factor family.
     
 0.945
bcl9l
B-cell CLL/lymphoma 9-like protein; Transcriptional regulator that may act as an activator (By similarity). Plays a role for mesoderm patterning in early embryogenesis; Belongs to the BCL9 family.
      
 0.766
tnfrsf21
Tumor necrosis factor receptor superfamily, member 21.
      
 0.669
marcksa
Myristoylated alanine-rich protein kinase C substrate a.
      
 0.666
rtn4rl2a
Reticulon 4 receptor-like 2 a.
   
  
 0.647
cita
Citron rho-interacting serine/threonine kinase a; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
      
 0.647
rtn4rl2b
Reticulon 4 receptor-like 2b.
      
 0.644
rtn4rl1b
Reticulon 4 receptor-like 1b.
      
 0.644
veph1
Ventricular zone-expressed PH domain-containing protein.
      
 0.630
ngfrb
Nerve growth factor receptor b.
      
 0.582
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.