Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ccl38.6C-C motif chemokine. (166 aa)    
Predicted Functional Partners:
ccr7
Chemokine (C-C motif) receptor 7; Belongs to the G-protein coupled receptor 1 family.
    
 0.945
ccr9a
Chemokine (C-C motif) receptor 9a; Belongs to the G-protein coupled receptor 1 family.
   
 0.914
ccr2-2
Chemokine (C-C motif) receptor 2; Belongs to the G-protein coupled receptor 1 family.
   
 0.895
ccl35.1
Chemokine (C-C motif) ligand 35, duplicate 1.
  
  
 
0.889
cxcr5
Chemokine (C-X-C motif) receptor 5; Belongs to the G-protein coupled receptor 1 family.
    
 0.847
xcr1a.1
Chemokine (C motif) receptor 1a, duplicate 1; Belongs to the G-protein coupled receptor 1 family.
   
 0.840
ccr10
Chemokine (C-C motif) receptor 10; Belongs to the G-protein coupled receptor 1 family.
   
 0.827
ccl38a.4
C-C motif chemokine.
  
 
 
0.812
ccl38a.5
C-C motif chemokine.
  
 
 
0.809
ccr2
Chemokine (C-C motif) receptor 2; Belongs to the G-protein coupled receptor 1 family.
   
 0.800
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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