STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ltkTyrosine-protein kinase receptor. (1530 aa)    
Predicted Functional Partners:
alkal1
ALK and LTK ligand 1.
    
 
 0.898
EML4
EMAP like 4.
   
 
 0.890
ptn
Pleiotrophin.
    
 
 0.864
mdka
Midkine-related growth factor Mdk1.
    
 
 0.814
alkal2a
ALK and LTK ligand 2a.
    
 
 0.800
alkal2b
ALK and LTK ligand 2b.
    
 
 0.800
grb2b
Growth factor receptor-bound protein 2b.
    
 
 0.782
mycn
N-myc protein; May function as a transcription factor.
    
 
 0.758
egfra
Epidermal growth factor receptor precursor.
   
 
 0.719
mdkb
Midkine-related growth factor Mdk2.
    
 
 0.673
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.