Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Q1LUM5_DANRESi:ch211-245j22.3. (194 aa)    
Predicted Functional Partners:
pi4kb
Phosphatidylinositol 4-kinase beta; Phosphorylates phosphatidylinositol (PI) in the first committed step in the production of the second messenger inositol- 1,4,5,-trisphosphate (PIP).
    
 
 0.623
slc32a1
Solute carrier family 32 (GABA vesicular transporter), member 1.
   
  
 0.478
gucy2f
Guanylate cyclase.
    
 0.459
gucy2d
Guanylate cyclase.
    
 0.459
gc2
Guanylate cyclase.
    
 0.459
wdr90
WD repeat domain 90.
    
   0.415
kcnf1b
Potassium voltage-gated channel, subfamily F, member 1b; Belongs to the potassium channel family.
   
 
 0.413
kcnf1a
Potassium voltage-gated channel, subfamily F, member 1a; Belongs to the potassium channel family.
   
 
 0.413
caska
Calcium/calmodulin-dependent serine protein kinase a; Belongs to the MAGUK family.
    
 0.409
caskb
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.409
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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