STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zp3a.1Zona pellucida glycoprotein 3a, tandem duplicate 1. (442 aa)    
Predicted Functional Partners:
zp2.2
Zona pellucida glycoprotein 2, tandem duplicate 2.
  
 
 0.941
zp2.3
Zona pellucida glycoprotein 2, tandem duplicate 3.
  
 
 0.880
zp2.5
Zona pellucida glycoprotein 2, tandem duplicate 5.
  
 
 0.856
pou3f3b
POU domain, class 3, transcription factor 3-B; Transcription factor that may play important roles in patterning the embryonic brain.
      
 0.830
zp2.1
Zona pellucida glycoprotein 2, tandem duplicate 1.
  
 
 0.816
zp2l1
Zona pellucida glycoprotein 2,-like 1.
   
  
 0.761
chia.4
Chitinase, acidic.4; Belongs to the glycosyl hydrolase 18 family.
   
 
 0.694
vtg6
Vitellogenin 6.
      
 0.671
zp2.6
Zona pellucida glycoprotein 2, tandem duplicate 6.
  
 
 0.667
zpax1
Zona pellucida protein AX 1.
   
  
 0.662
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.