Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
zp3a.2Zona pellucida glycoprotein 3a, tandem duplicate 2. (432 aa)    
Predicted Functional Partners:
zp2.2
Zona pellucida glycoprotein 2, tandem duplicate 2.
  
  
 0.844
zp2.3
Zona pellucida glycoprotein 2, tandem duplicate 3.
  
  
 0.798
zp2.5
Zona pellucida glycoprotein 2, tandem duplicate 5.
  
   
 0.770
zp2l1
Zona pellucida glycoprotein 2,-like 1.
   
  
 0.770
zpax1
Zona pellucida protein AX 1.
   
  
 0.730
zgc:171776
Zgc:171776.
   
  0.693
A8HAI9_DANRE
Si:ch211-12h2.8.
   
  0.693
ENSDARP00000114321
Si:dkey-90l23.2.
   
  0.693
zgc:153499
Zgc:153499.
   
  0.693
ENSDARP00000143901
Si:dkey-240e12.6.
   
  0.691
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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