Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSDARP00000142481 | si:dkey-51e6.1 | ENSDARP00000142481 | ENSDARP00000118809 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | Si:dkey-51e6.1. | 0.553 |
Ndufa13 | clpp | ENSDARP00000134299 | ENSDARP00000116965 | Uncharacterized protein. | ATP-dependent Clp protease proteolytic subunit. | 0.638 |
Ndufa13 | ndufa11 | ENSDARP00000134299 | ENSDARP00000062786 | Uncharacterized protein. | NADH:ubiquinone oxidoreductase subunit A11. | 0.995 |
Ndufa13 | ndufa7 | ENSDARP00000134299 | ENSDARP00000053284 | Uncharacterized protein. | NADH:ubiquinone oxidoreductase subunit A7. | 0.999 |
Ndufa13 | ndufb11 | ENSDARP00000134299 | ENSDARP00000063816 | Uncharacterized protein. | NADH:ubiquinone oxidoreductase subunit B11. | 0.999 |
Ndufa13 | ndufb7 | ENSDARP00000134299 | ENSDARP00000043932 | Uncharacterized protein. | NADH:ubiquinone oxidoreductase subunit B7. | 0.999 |
Ndufa13 | ndufs7 | ENSDARP00000134299 | ENSDARP00000098301 | Uncharacterized protein. | NADH:ubiquinone oxidoreductase core subunit S7; Belongs to the complex I 20 kDa subunit family. | 0.999 |
Ndufa13 | ndufs8a | ENSDARP00000134299 | ENSDARP00000059226 | Uncharacterized protein. | NADH dehydrogenase (Ubiquinone) Fe-S protein 8, (NADH-coenzyme Q reductase). | 0.999 |
Ndufa13 | si:dkey-51e6.1 | ENSDARP00000134299 | ENSDARP00000118809 | Uncharacterized protein. | Si:dkey-51e6.1. | 0.712 |
clpp | Ndufa13 | ENSDARP00000116965 | ENSDARP00000134299 | ATP-dependent Clp protease proteolytic subunit. | Uncharacterized protein. | 0.638 |
clpp | ndufa11 | ENSDARP00000116965 | ENSDARP00000062786 | ATP-dependent Clp protease proteolytic subunit. | NADH:ubiquinone oxidoreductase subunit A11. | 0.529 |
clpp | ndufa7 | ENSDARP00000116965 | ENSDARP00000053284 | ATP-dependent Clp protease proteolytic subunit. | NADH:ubiquinone oxidoreductase subunit A7. | 0.451 |
clpp | ndufb11 | ENSDARP00000116965 | ENSDARP00000063816 | ATP-dependent Clp protease proteolytic subunit. | NADH:ubiquinone oxidoreductase subunit B11. | 0.518 |
clpp | ndufb7 | ENSDARP00000116965 | ENSDARP00000043932 | ATP-dependent Clp protease proteolytic subunit. | NADH:ubiquinone oxidoreductase subunit B7. | 0.651 |
clpp | ndufs7 | ENSDARP00000116965 | ENSDARP00000098301 | ATP-dependent Clp protease proteolytic subunit. | NADH:ubiquinone oxidoreductase core subunit S7; Belongs to the complex I 20 kDa subunit family. | 0.839 |
clpp | ndufs8a | ENSDARP00000116965 | ENSDARP00000059226 | ATP-dependent Clp protease proteolytic subunit. | NADH dehydrogenase (Ubiquinone) Fe-S protein 8, (NADH-coenzyme Q reductase). | 0.895 |
clpp | si:dkey-51e6.1 | ENSDARP00000116965 | ENSDARP00000118809 | ATP-dependent Clp protease proteolytic subunit. | Si:dkey-51e6.1. | 0.611 |
hist1h4l | si:dkey-51e6.1 | ENSDARP00000077832 | ENSDARP00000118809 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | Si:dkey-51e6.1. | 0.553 |
ndufa11 | Ndufa13 | ENSDARP00000062786 | ENSDARP00000134299 | NADH:ubiquinone oxidoreductase subunit A11. | Uncharacterized protein. | 0.995 |
ndufa11 | clpp | ENSDARP00000062786 | ENSDARP00000116965 | NADH:ubiquinone oxidoreductase subunit A11. | ATP-dependent Clp protease proteolytic subunit. | 0.529 |
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