Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
selpSelectin P. (868 aa)    
Predicted Functional Partners:
E9QH19_DANRE
Si:dkey-261h17.1.
     
  0.984
selplg
P-selectin glycoprotein ligand-1.
     
 0.976
cd44a
CD44 molecule (Indian blood group) a.
    
 0.955
ENSDARP00000138435
Si:ch211-286o17.1.
    
 0.910
glg1a
Golgi glycoprotein 1a.
    
 0.850
glg1b
Golgi glycoprotein 1b.
    
 0.850
vcam1b
Vascular cell adhesion molecule 1b.
   
 
 0.847
vwf
Von Willebrand factor.
   
  
 0.819
itga2b
Integrin, alpha 2b (Platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41B); Belongs to the integrin alpha chain family.
   
 
 0.795
nfkb2
Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100).
   
 0.779
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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