STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stx11b.2Syntaxin 11b, tandem duplicate 2. (288 aa)    
Predicted Functional Partners:
stxbp5b
Syntaxin-binding protein 5b (tomosyn).
    
 0.918
stxbp5l
Syntaxin-binding protein 5-like; May play a role in vesicle trafficking and exocytosis. Belongs to the WD repeat L(2)GL family.
    
 0.908
stx11a
Syntaxin 11a; Belongs to the syntaxin family.
  
  
 
0.904
stxbp5a
Syntaxin-binding protein 5a (tomosyn).
    
 0.904
stx11b.1
Syntaxin 11b, tandem duplicate 1.
  
  
 
0.902
vamp3
Vesicle-associated membrane protein 3 (Cellubrevin).
    
 0.857
wdhd1
WD repeat and HMG-box DNA-binding protein 1.
      
 0.856
snap23.1
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.852
vamp4
Vesicle-associated membrane protein 4.
    
 0.821
vamp8
Vesicle-associated membrane protein 8 (Endobrevin).
    
 0.806
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.