Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ca4bCarbonic anhydrase IV b. (321 aa)    
Predicted Functional Partners:
rpf2
Ribosome production factor 2 homolog.
   
 
 0.586
stoml3b
Stomatin (EPB72)-like 3b.
   
  
 0.581
cnfn
Cornifelin homolog; Belongs to the cornifelin family.
    
 
 0.566
slc26a3.2
Chloride anion exchanger; Chloride/bicarbonate exchanger. Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
   
 
 0.509
grwd1
Glutamate-rich WD repeat-containing 1.
   
  
 0.503
cahz
Carbonic anhydrase; Reversible hydration of carbon dioxide.
  
 
0.492
slc26a6l
Solute carrier family 26 member 6,-like.
   
 
 0.486
ca2
Carbonic anhydrase II; Belongs to the alpha-carbonic anhydrase family.
  
 
0.480
rrs1
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
   0.472
slc26a6
Solute carrier family 26 member 6.
   
 
 0.470
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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