Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
F1QFG5_DANRESi:dkey-177p2.6. (285 aa)    
Predicted Functional Partners:
xiap
X-linked inhibitor of apoptosis.
    
   0.784
ect2l
Coiled-coil domain-containing 28A.
   
  
 0.782
zfyve21
Zinc finger, FYVE domain-containing 21.
      
 0.772
pinx1
PIN2 (TERF1)-interacting telomerase inhibitor 1.
      
 0.739
ciao2b
Cytosolic iron-sulfur assembly component 2B.
      
 0.720
ndufb2
NADH:ubiquinone oxidoreductase subunit B2.
      
 0.720
fam222a
Family with sequence similarity 222 member A.
      
 0.700
b2ml
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.
   
  
 0.695
znf593
Zinc finger protein 593.
      
 0.689
calm3a
Calmodulin 3a (phosphorylase kinase, delta).
      
 0.686
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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