STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acot21Acyl-CoA thioesterase 21. (448 aa)    
Predicted Functional Partners:
acot7
Acyl-CoA thioesterase 7.
   
 
 0.921
acot19
Acyl-CoA thioesterase 19.
  
 
 
0.914
them4
Thioesterase superfamily member 4.
     
 0.911
acot20
Acyl-CoA thioesterase 20.
  
  
 
0.900
srsf7a
Serine and arginine-rich-splicing factor 7a.
      
 0.838
u2surp
U2 snRNP-associated SURP domain-containing.
      
 0.837
fubp3
Far upstream element (FUSE)-binding protein 3.
      
 0.804
srsf3a
Serine and arginine-rich-splicing factor 3a.
      
 0.744
srsf3a-2
Serine and arginine rich splicing factor 3a.
      
 0.744
pfkfb2b
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2b.
     
 0.716
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.