STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lpar2bLysophosphatidic acid receptor 2b; Belongs to the G-protein coupled receptor 1 family. (369 aa)    
Predicted Functional Partners:
lpar1
Lysophosphatidic acid receptor 1; Belongs to the G-protein coupled receptor 1 family.
  
  
0.947
gna13a
Guanine nucleotide-binding protein (G protein), alpha 13a.
   
 0.926
gna13b
Guanine nucleotide-binding protein (G protein), alpha 13b.
    
 0.925
gna12a
Guanine nucleotide-binding protein (G protein) alpha 12a.
    
 0.925
lpar4
Lysophosphatidic acid receptor 4; Belongs to the G-protein coupled receptor 1 family.
     
 0.917
lpar2a
Lysophosphatidic acid receptor 2a; Belongs to the G-protein coupled receptor 1 family.
  
 
0.908
tmem169a
Transmembrane protein 169a.
      
 0.838
slc10a4
Solute carrier family 10 member 4.
      
 0.745
nkain1
Sodium/potassium-transporting ATPase subunit beta-1-interacting protein 1; Belongs to the NKAIN family.
      
 0.743
mst1
Macrophage stimulating 1 (Hepatocyte growth factor-like); Belongs to the peptidase S1 family. Plasminogen subfamily.
    
 
 0.549
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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