Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hebp2Heme-binding protein 2. (190 aa)    
Predicted Functional Partners:
ms4a17a.11
Membrane-spanning 4-domains, subfamily A, member 17A.11.
      
 0.813
si:dkey-14d8.6
Si:dkey-14d8.6 protein.
      
 0.740
larp6b
La ribonucleoprotein 6, translational regulator b.
   
  
 0.673
pdcd6
Programmed cell death 6.
    
   0.652
pef1
Peflin; Calcium-binding protein that acts as an adapter that bridges unrelated proteins or stabilizes weak protein-protein complexes in response to calcium. Acts as a negative regulator of ER-Golgi transport (By similarity).
    
   0.652
ect2l
Coiled-coil domain-containing 28A.
   
  
 0.618
zfyve21
Zinc finger, FYVE domain-containing 21.
      
 0.594
F1QFG5_DANRE
Si:dkey-177p2.6.
      
 0.594
pinx1
PIN2 (TERF1)-interacting telomerase inhibitor 1.
      
 0.584
lrpprc
Leucine-rich pentatricopeptide repeat-containing.
    
 
 0.581
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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