STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc52a3Solute carrier family 52, riboflavin transporter, member 3-A; Plasma membrane transporter mediating the uptake by cells of the water soluble vitamin B2/riboflavin that plays a key role in biochemical oxidation-reduction reactions of the carbohydrate, lipid, and amino acid metabolism. (448 aa)    
Predicted Functional Partners:
slc35c2
Solute carrier family 35 member C2.
   
  
 0.843
slc38a6
Probable sodium-coupled neutral amino acid transporter 6; Probable sodium-dependent amino acid/proton antiporter, could be a neuronal transporter for glutamate. Belongs to the amino acid/polyamine transporter 2 family.
      
 0.739
grxcr1b
Glutaredoxin and cysteine-rich domain-containing 1 b.
      
 0.664
slc41a2b
Solute carrier family 41 member 2b.
      
 0.648
rfk
Riboflavin kinase.
      
 0.630
slc12a5b
Solute carrier family 12 member 5b.
      
 0.567
tmem241
Transmembrane protein 241.
      
 0.544
cdh23
Cadherin-related 23.
   
  
 0.500
cdh23-2
Cadherin-related 23.
      
 0.462
eya4
Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family.
      
 0.452
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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