Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
afg1lbLactation elevated protein 1 homolog B; Belongs to the AFG1 ATPase family. (503 aa)    
Predicted Functional Partners:
gucd1
Guanylyl cyclase domain-containing 1.
      
 0.605
upb1
Ureidopropionase, beta.
      
 0.604
mrps9
Mitochondrial ribosomal protein S9.
  
   0.529
dtnbp1b
Dystrobrevin-binding protein 1b.
      
 0.529
znf280d
Zinc finger protein 280D.
      
 0.501
dmgdh
Dimethylglycine dehydrogenase.
      
 0.500
ice2
Interactor of little elongator complex ELL subunit 2.
      
 0.477
clpp
ATP-dependent Clp protease proteolytic subunit.
   
 
 0.476
bcas3
BCAS3 microtubule-associated cell migration factor.
      
 0.475
SUSD2
Sushi domain containing 2.
      
 0.454
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.