STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cyp2n13Cytochrome P450, family 2, subfamily N, polypeptide 13; Belongs to the cytochrome P450 family. (497 aa)    
Predicted Functional Partners:
cyp3a65
Cytochrome P450, family 3, subfamily A, polypeptide 65; Belongs to the cytochrome P450 family.
  
0.738
faxdc2
Fatty acid hydroxylase domain-containing 2; Belongs to the sterol desaturase family.
   
 0.726
cyp3c4
Cytochrome P450, family 3, subfamily C, polypeptide 4; Belongs to the cytochrome P450 family.
  
0.699
cyp3c1
Cytochrome P450, family 3, subfamily c, polypeptide 1; Belongs to the cytochrome P450 family.
  
0.690
cyp3c3
Cytochrome P450, family 3, subfamily c, polypeptide 3; Belongs to the cytochrome P450 family.
  
0.618
ces3
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
   
 
 0.597
cyp8b1
Cytochrome P450, family 8, subfamily B, polypeptide 1.
   
  
 0.586
cyp2ad2
Cytochrome P450, family 2, subfamily AD, polypeptide 2; Belongs to the cytochrome P450 family.
  
 
0.578
cyp8b3
Cytochrome P450, family 8, subfamily B, polypeptide 3.
   
  
 0.573
cyp1a
Cytochrome P450, family 1, subfamily A; Belongs to the cytochrome P450 family.
  
 
0.572
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.