Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cyp2p10Cytochrome P450, family 2, subfamily P, polypeptide 10; Belongs to the cytochrome P450 family. (497 aa)    
Predicted Functional Partners:
alox5b.3
Arachidonate 5-lipoxygenase b, tandem duplicate 3.
    
 0.813
cyp3a65
Cytochrome P450, family 3, subfamily A, polypeptide 65; Belongs to the cytochrome P450 family.
  
 
0.730
cyp3c4
Cytochrome P450, family 3, subfamily C, polypeptide 4; Belongs to the cytochrome P450 family.
  
 
0.724
suox
Sulfite oxidase.
     
 0.717
cyp3c1
Cytochrome P450, family 3, subfamily c, polypeptide 1; Belongs to the cytochrome P450 family.
  
 
0.704
cyp26c1
Cytochrome P450, family 26, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family.
  
  
 0.699
cyp3c3
Cytochrome P450, family 3, subfamily c, polypeptide 3; Belongs to the cytochrome P450 family.
  
 
0.697
ephx2
Epoxide hydrolase 2, cytoplasmic.
   
 0.666
E9QGC1_DANRE
Si:dkey-17e16.9.
   
 0.645
trit1
tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37; Belongs to the IPP transferase family.
     
 0.638
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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