Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
vmo1aVitelline membrane outer layer 1 homolog a. (203 aa)    
Predicted Functional Partners:
ces2b
Si:ch211-93f2.1; Belongs to the type-B carboxylesterase/lipase family.
    
 0.783
vtg7
Vitellogenin 7.
    
 
 0.674
B8JME6_DANRE
Si:ch1073-126c3.2.
      
 0.662
efhc1
EF-hand domain (C-terminal)-containing 1.
    
 
 0.595
nots
Nothepsin; Belongs to the peptidase A1 family.
   
 0.588
vtg2
Vitellogenin 2.
    
 
 0.492
zgc:66426
Zgc:66426.
    
 
 0.489
sema5bb
Semaphorin-5B.
      
 0.487
serpina1
Serine (Or cysteine) proteinase inhibitor, clade A (Alpha-1 antiproteinase, antitrypsin), member 1; Belongs to the serpin family.
    
 
 0.471
shbg
Sex hormone-binding globulin.
      
 0.467
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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