Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
mpeg1.2Novel protein similar to H.sapiens MPEG1, macrophage expressed gene 1 (MPEG1, zgc:110354). (713 aa)    
Predicted Functional Partners:
irg1l
Immunoresponsive gene 1,-like.
   
  
 0.802
tmem238a
Transmembrane protein 238a.
   
  
 0.681
tmem39b
Transmembrane protein 39B.
      
 0.594
tmem176l.4
Transmembrane protein 176l.4.
   
  
 0.587
ENSDARP00000131071
Si:dkey-247k7.2.
   
  
 0.582
cxcl8a
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
      
 0.579
cbln11
Cerebellin 11.
      
 0.570
X1WG46_DANRE
Si:dkey-239b22.1.
      
 0.570
ENSDARP00000142441
Si:ch211-183d5.2.
      
 0.570
xcr1b.1
Chemokine (C motif) receptor 1b, duplicate 1; Belongs to the G-protein coupled receptor 1 family.
      
 0.560
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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