Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rell2RELT-like 2. (401 aa)    
Predicted Functional Partners:
rell1
RELT-like 1.
     
  0.909
relt
RELT TNF receptor.
     
  0.909
ARHGEF17
Rho guanine nucleotide exchange factor (GEF) 17.
     
  0.830
elp2
Elongator complex protein 2; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. The elongator complex catalyzes formation of carboxymethyluridine in the wobble base at position 34 in tRNAs; Belongs to the WD repeat ELP2 family.
    
 0.632
tnfrsf19
Tumor necrosis factor receptor superfamily, member 19.
     
  0.614
ccdc15
Coiled-coil domain-containing 15.
      
 0.529
dhx38
DEAH (Asp-Glu-Ala-His) box polypeptide 38.
      
 0.525
rwdd
RWD domain-containing 4.
     
  0.523
rwdd1
RWD domain-containing 1.
     
  0.523
il17a/f2
Interleukin 17a/f2.
  
     0.475
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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