Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| atp6v1c1b | atraid | ENSDARP00000052090 | ENSDARP00000063695 | V-type proton ATPase subunit C 1-B; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells (By similarity). | All-trans retinoic acid-induced differentiation factor; Involved in osteoblast cell differentiation. May play a role in inducing the cell cycle arrest (By similarity). | 0.609 |
| atp6v1c1b | cped1 | ENSDARP00000052090 | ENSDARP00000116630 | V-type proton ATPase subunit C 1-B; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells (By similarity). | Cadherin-like and PC-esterase domain-containing 1. | 0.745 |
| atp6v1c1b | ggps1 | ENSDARP00000052090 | ENSDARP00000134732 | V-type proton ATPase subunit C 1-B; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells (By similarity). | Geranylgeranyl diphosphate synthase 1; Belongs to the FPP/GGPP synthase family. | 0.486 |
| atraid | atp6v1c1b | ENSDARP00000063695 | ENSDARP00000052090 | All-trans retinoic acid-induced differentiation factor; Involved in osteoblast cell differentiation. May play a role in inducing the cell cycle arrest (By similarity). | V-type proton ATPase subunit C 1-B; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells (By similarity). | 0.609 |
| atraid | cped1 | ENSDARP00000063695 | ENSDARP00000116630 | All-trans retinoic acid-induced differentiation factor; Involved in osteoblast cell differentiation. May play a role in inducing the cell cycle arrest (By similarity). | Cadherin-like and PC-esterase domain-containing 1. | 0.587 |
| atraid | eif2b4 | ENSDARP00000063695 | ENSDARP00000106707 | All-trans retinoic acid-induced differentiation factor; Involved in osteoblast cell differentiation. May play a role in inducing the cell cycle arrest (By similarity). | Eukaryotic translation initiation factor 2B, subunit 4 delta; Belongs to the eIF-2B alpha/beta/delta subunits family. | 0.688 |
| atraid | ggps1 | ENSDARP00000063695 | ENSDARP00000134732 | All-trans retinoic acid-induced differentiation factor; Involved in osteoblast cell differentiation. May play a role in inducing the cell cycle arrest (By similarity). | Geranylgeranyl diphosphate synthase 1; Belongs to the FPP/GGPP synthase family. | 0.680 |
| atraid | mxra7 | ENSDARP00000063695 | ENSDARP00000120648 | All-trans retinoic acid-induced differentiation factor; Involved in osteoblast cell differentiation. May play a role in inducing the cell cycle arrest (By similarity). | Matrix-remodelling-associated 7. | 0.830 |
| atraid | ostm1 | ENSDARP00000063695 | ENSDARP00000150259 | All-trans retinoic acid-induced differentiation factor; Involved in osteoblast cell differentiation. May play a role in inducing the cell cycle arrest (By similarity). | Osteoclastogenesis-associated transmembrane protein 1. | 0.680 |
| atraid | slc37a3 | ENSDARP00000063695 | ENSDARP00000141570 | All-trans retinoic acid-induced differentiation factor; Involved in osteoblast cell differentiation. May play a role in inducing the cell cycle arrest (By similarity). | MFS domain-containing protein. | 0.883 |
| atraid | snx17 | ENSDARP00000063695 | ENSDARP00000040190 | All-trans retinoic acid-induced differentiation factor; Involved in osteoblast cell differentiation. May play a role in inducing the cell cycle arrest (By similarity). | Sorting nexin-17; Critical regulator of endosomal recycling of numerous surface proteins, including integrins, signaling receptor and channels. Binds to NPxY sequences in the cytoplasmic tails of target cargos. Associates with retriever and CCC complexes to prevent lysosomal degradation and promote cell surface recycling of numerous cargos such as integrins ITGB1, ITGB5 and their associated alpha subunits. Also required for maintenance of normal cell surface levels of APP and LRP1. Interacts with membranes containing phosphatidylinositol 3-phosphate (PtdIns(3P)). | 0.629 |
| atraid | sumf2 | ENSDARP00000063695 | ENSDARP00000091977 | All-trans retinoic acid-induced differentiation factor; Involved in osteoblast cell differentiation. May play a role in inducing the cell cycle arrest (By similarity). | Sulfatase-modifying factor 2. | 0.839 |
| atraid | tmem161b | ENSDARP00000063695 | ENSDARP00000072863 | All-trans retinoic acid-induced differentiation factor; Involved in osteoblast cell differentiation. May play a role in inducing the cell cycle arrest (By similarity). | Transmembrane protein 161B. | 0.744 |
| cped1 | atp6v1c1b | ENSDARP00000116630 | ENSDARP00000052090 | Cadherin-like and PC-esterase domain-containing 1. | V-type proton ATPase subunit C 1-B; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells (By similarity). | 0.745 |
| cped1 | atraid | ENSDARP00000116630 | ENSDARP00000063695 | Cadherin-like and PC-esterase domain-containing 1. | All-trans retinoic acid-induced differentiation factor; Involved in osteoblast cell differentiation. May play a role in inducing the cell cycle arrest (By similarity). | 0.587 |
| cped1 | ggps1 | ENSDARP00000116630 | ENSDARP00000134732 | Cadherin-like and PC-esterase domain-containing 1. | Geranylgeranyl diphosphate synthase 1; Belongs to the FPP/GGPP synthase family. | 0.453 |
| eif2b4 | atraid | ENSDARP00000106707 | ENSDARP00000063695 | Eukaryotic translation initiation factor 2B, subunit 4 delta; Belongs to the eIF-2B alpha/beta/delta subunits family. | All-trans retinoic acid-induced differentiation factor; Involved in osteoblast cell differentiation. May play a role in inducing the cell cycle arrest (By similarity). | 0.688 |
| eif2b4 | snx17 | ENSDARP00000106707 | ENSDARP00000040190 | Eukaryotic translation initiation factor 2B, subunit 4 delta; Belongs to the eIF-2B alpha/beta/delta subunits family. | Sorting nexin-17; Critical regulator of endosomal recycling of numerous surface proteins, including integrins, signaling receptor and channels. Binds to NPxY sequences in the cytoplasmic tails of target cargos. Associates with retriever and CCC complexes to prevent lysosomal degradation and promote cell surface recycling of numerous cargos such as integrins ITGB1, ITGB5 and their associated alpha subunits. Also required for maintenance of normal cell surface levels of APP and LRP1. Interacts with membranes containing phosphatidylinositol 3-phosphate (PtdIns(3P)). | 0.604 |
| ggps1 | atp6v1c1b | ENSDARP00000134732 | ENSDARP00000052090 | Geranylgeranyl diphosphate synthase 1; Belongs to the FPP/GGPP synthase family. | V-type proton ATPase subunit C 1-B; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells (By similarity). | 0.486 |
| ggps1 | atraid | ENSDARP00000134732 | ENSDARP00000063695 | Geranylgeranyl diphosphate synthase 1; Belongs to the FPP/GGPP synthase family. | All-trans retinoic acid-induced differentiation factor; Involved in osteoblast cell differentiation. May play a role in inducing the cell cycle arrest (By similarity). | 0.680 |
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