STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rac1lRac family small GTPase 1,-like. (188 aa)    
Predicted Functional Partners:
itsn2a
Intersectin 2a.
    
 
 0.791
itsn2b
Intersectin 2b.
    
 
 0.791
itsn1
Intersectin 1 (SH3 domain protein).
    
 
 0.761
cyp27a7
Cytochrome P450, family 27, subfamily A, polypeptide 7; Belongs to the cytochrome P450 family.
    
 
 0.661
cyp27a1.4
Cytochrome P450, family 27, subfamily A, polypeptide 1, gene 4; Belongs to the cytochrome P450 family.
    
 
 0.660
syngr2b
Synaptogyrin.
   
  
 0.654
arhgdia
Rho GDP dissociation inhibitor (GDI) alpha.
   
 
 0.620
xaf1
XIAP-associated factor 1.
   
 
 0.615
cyp8b3
Cytochrome P450, family 8, subfamily B, polypeptide 3.
    
 
 0.590
arhgdig
Rho GDP dissociation inhibitor (GDI) gamma.
   
 
 0.559
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.